Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Nicotiana tabacum

CDS Sequence

CDS ID	lcl\|NW_015792610.1_cds_XP_016513180.1_2500
CDS Infomation	[gene=LOC107830203] [db_xref=GeneID:107830203] [protein=probable E3 ubiquitin ligase SUD1 isoform X2] [protein_id=XP_016513180.1] [location=join(527..874,3613..4302,4535..5302,5391..5602,5723..6076,7181..7338,7426..7589,7674..7820,8972..9466)] [gbkey=CDS]
Sequence	ATGGAGTTCGCAACGGCGGTGCCGGCGTCTAGTAACGGCGCCGAGGGAATTTCTCCGGCG GAGCGCTCCTCCTCCGTTGATGCGATCAATTCGTCTTCATCCCCGTCTTCTTCCTCGGGT TCAGTTGCGTTGTCTCCGGCGCAGGTGATTGGTAAGGATTCGAATTCTGTGGCTACGAGC AGGTATGATGACGACGACGAAGAAGAGGACGTTTGTCGGATCTGTCGAAACCCTGGCGAG GCCGATAATCCCCTGCGGTATCCTTGTGCTTGCAGTGGTAGCATAAAGTTTGTTCACCAG GATTGCTTACTTCAATGGCTTAATCACAGTAACGCTCGCCAATGCGAGGTATGCAAACAT GCATTCTCGTTTTCGCCAGTTTATGCTGAGAATGCTCCGGCTAGGCTCCCTTTTCAAGAG TTTGTGGTTGGGATGGCAATGAAAGCCTGCCATGTCCTGCAATTCTTCCTGCGTCTTAGC TTTGTGCTTTCTGTATGGCTCATCATAATACCTTTTATTACATTCTGGATATGGCGGTTG GCTTTTGTTAGAAGTTTTGGAGAAGCTCAGAGACTCTTTTTGGGTCACTTATCCACAACC ATTATTCTTACCGACTGTCTCCATGGGTTTCTGCTCTCTGCTAGCATTGTTTTCATCTTT CTTGGGGCAACTTCATTAAGGGATTACTTCAGGCATTTGCGCGAACTTGGGGGACAGGAA GCTGACAGGGAAGACGATGGGGACAGAAATGCTGCCCGTGCTCCAAGAAGACCTGCTGTT CCAGCTAACGGAAATTTTGCTGATGGAAATGGGGAAGATGCTAATGGTGCACAGGGGATT GCTGGAGCTGGCCAGATAATCCGGAGAAATGCAGAAAATGTTGCGGCCCGTTGGGAGATG CAGGCAGCAAGGCTTGAAGCTCATGTCGAACAGATGTTTGATGGTTTGGATGATGCTGAT GGGGCAGAGGATGTCCCTTTTGATGAGCTTGTTGGCATGCAGGGTCCTGTGTTCCATCTC GTTGAAAATGCATTTACTGTTCTTGCGAGTAATATGATATTTCTTGGAGTGGTGATCTTT GTTCCCTTTTCATTAGGACGAATTATACTCTATTATTTGTCTTGGCTTTTGTCCTCTGCG AGCAATCCAGTATTGTCCACTGTTATGCCACTAGCTGAAACAGCACTTTCCTTGGCCAAT ATTACTCTGGATAGTGCGTGGACTGCTGTTGCAAACTTAACTCCTGCTAACGAAGAGAGC AGTTTGCTTGGTCAAGCCACAGAAATGATAACAGCAAATGCCACTGGATTGAGTGAGGCG GCAAACAACCTCAGTACAACAGTGTCTGCTGATCTTTTGAAAGGGTCAGCTGTTGGAACA TCCCGGCTTTCTGATGTTACAACTCTTGCCGTTGGCTACATGTTTATATTTTCTCTGGTC TTCTTTTACCTCGGGATAGTTGCTTTAATCCGATACACCAGGGGAGAGCCTTTGACGTTG GGGAGATTCTATGGTATTGCTTCCATTGCAGAAACCATTCCCTCTCTCTTTAGACAATTT GTAGCAGCTATGAGGCATCTGATGACTATGATTAAGGTTGCTTTCCTCCTTGTCATTGAA CTTGGGGTTTTCCCTTTGATGTGCGGATGGTGGCTGGATGTTTGCACCATTAGAATGTTT GGGAAGTCGATCACACAAAGAGTGGAATTCTTTTCAGTATCTCCATTGGCAAGCTCATTA GTTCATTGGGTTGTAGGGATTGTTTACATGCTACAAATAAGTATCTTTGTTAGCCTTCTT CGAGGGGTCCTGCGTAATGGAGTGCTTTACTTTCTTCGAGATCCGGCAGACCCCAATTAC AACCCATTCCGGGATTTGATCGATGATCCTGTACATAAGCATGCTCGTCGAGTGCTTTTG TCAGTTGCAGTCTATGGAAGCTTAATAGTGATGCTCGTGTATCTGCCTGTCAAACTTGCC ATGCAAATGGCTCCATCCATTTTCCCACTAGATATCTCTGTATCTGATCCATTTACTGAA ATACCTGCCGACATGCTTCTCTTCCAAATCTGTATTCCCTTTGCAATTGAGCATTTTAAG CTGCGTACAACAATCAAGTCTCTGCTCCGCTATTGGTTTACTGCAGTGGGCTGGGCTCTT GGTCTTACTGATTTCTTACTTCCCCGACCTGAGGATAATGGTGGACAAGAGAATGGGAAT GGCGACCAAGGAAGGGTGGAGTGGTTTCAAGCCGTGCATGGTGTACCAGATCGAGCCTTG GCAGGGTTTGCTCCTGATAACAGAGCTAGGCATGCAGCAGCTAATACCAACTTTGTGGAA GACTATGACACTGACGAACAAGCGGATACCGAGTACGCCTTTGTGCTCCGTATCGTGCTG TTGTTGGTAGTGGCTTGGATGACTCTCCTCCTCTTTAATTCTGCCCTCATAATTGTACCG ATTTCACTTGGACGTGCGCTCTTCAATTCCCTCCCGCTGCTTCCAATAACACATGGAATC AAGTGCAATGATTTGTATGCATTTGTAATTGGAAGTTATGCCATCTGGACAGCGATTGCT GGAGTGAGGTACTCAATTGATCAAATTAGGACTAGGAGGGTTACAGTTTTGATGAACCAA ATTTGGAAATGGTGCGTCATTGTTCTGAAGAGTTCTGCACTGTTGTCAATATGGATTCTT ATCATCCCTGTGTTAATTGGGCTGCTTTTTGAACTTCTGGTCATTGTGCCAATGCGAGTT CCCATTGACGAAAGCCCAGTCTTCCTTCTTTATCAGGATTGGGCTTTAGGACTAATCTTT CTAAAGATCTGGACCAGGCTGGTTATGCTAGATCATATGATGCCACTGGTGGATGAGAGC TGGCGCCTGAAATTTGAGAGGGTGAGGGAAAACGGTTTCTCTAGGTTGCAAGGCTTTTGG GTGCTTCGGGAGATTGTCCTTCCTATTATCATGAAGCTGCTTACGGCATTGTGTGTTCCA TATGTTTTAGCCAAGGGTGTATTCCCAATATTTGGTTACCCCTTGCTTGTCAACTCTGCC GTTTACCGATTTGCTTGGCTTGGCTGCCTTGGCTTCAGTCTGTTATGTTTCTGTGCTAAG CGTTTCCACGTATGGTTCACCAATCTCCACAATTCTATACGTGATGACCGTTATTTGATT GGCCGTAGACTTCATAATTTTGGGGAAGAGGTAGAGCGAAGGCAAAATGAAGTAGAGTTG TCCAGAGAGGGAGAGATCCCTATAGTGAATGGGGATGTCCAAGAGGTTGCTGATGTAGGA CTAAGACACAGGCATGGCGTTACCCAAGATGCTTAA

Peptide Sequence

PEP ID	XP_016513180.1
PEP Infomation	PREDICTED: probable E3 ubiquitin ligase SUD1 isoform X2 [Nicotiana tabacum]
Sequence	MEFATAVPASSNGAEGISPAERSSSVDAINSSSSPSSSSGSVALSPAQVIGKDSNSVATS RYDDDDEEEDVCRICRNPGEADNPLRYPCACSGSIKFVHQDCLLQWLNHSNARQCEVCKH AFSFSPVYAENAPARLPFQEFVVGMAMKACHVLQFFLRLSFVLSVWLIIIPFITFWIWRL AFVRSFGEAQRLFLGHLSTTIILTDCLHGFLLSASIVFIFLGATSLRDYFRHLRELGGQE ADREDDGDRNAARAPRRPAVPANGNFADGNGEDANGAQGIAGAGQIIRRNAENVAARWEM QAARLEAHVEQMFDGLDDADGAEDVPFDELVGMQGPVFHLVENAFTVLASNMIFLGVVIF VPFSLGRIILYYLSWLLSSASNPVLSTVMPLAETALSLANITLDSAWTAVANLTPANEES SLLGQATEMITANATGLSEAANNLSTTVSADLLKGSAVGTSRLSDVTTLAVGYMFIFSLV FFYLGIVALIRYTRGEPLTLGRFYGIASIAETIPSLFRQFVAAMRHLMTMIKVAFLLVIE LGVFPLMCGWWLDVCTIRMFGKSITQRVEFFSVSPLASSLVHWVVGIVYMLQISIFVSLL RGVLRNGVLYFLRDPADPNYNPFRDLIDDPVHKHARRVLLSVAVYGSLIVMLVYLPVKLA MQMAPSIFPLDISVSDPFTEIPADMLLFQICIPFAIEHFKLRTTIKSLLRYWFTAVGWAL GLTDFLLPRPEDNGGQENGNGDQGRVEWFQAVHGVPDRALAGFAPDNRARHAAANTNFVE DYDTDEQADTEYAFVLRIVLLLVVAWMTLLLFNSALIIVPISLGRALFNSLPLLPITHGI KCNDLYAFVIGSYAIWTAIAGVRYSIDQIRTRRVTVLMNQIWKWCVIVLKSSALLSIWIL IIPVLIGLLFELLVIVPMRVPIDESPVFLLYQDWALGLIFLKIWTRLVMLDHMMPLVDES WRLKFERVRENGFSRLQGFWVLREIVLPIIMKLLTALCVPYVLAKGVFPIFGYPLLVNSA VYRFAWLGCLGFSLLCFCAKRFHVWFTNLHNSIRDDRYLIGRRLHNFGEEVERRQNEVEL SREGEIPIVNGDVQEVADVGLRHRHGVTQDA

Transcript Sequence

Gene sequence data has not been registered.